Workshop 2. High Throughput Sequencing Application Session Online Materials¶
Introduction¶
Illumina Sequencing Technology¶
An animation created by Illumina describing their sequencing by synthesis technology.
High Throughput Sequencing Data Primer¶
Embarrasingly brief description of the form of high-throughput sequencing data covering:
- FASTQ format
- PHRED quality scores
- single-end vs paired-end datasets
- dataset read length
Sequencing Data QC and Analysis Primer¶
An even more embarrassingly brief description of the high level quality control and analysis process for FASTQ formatted high-throughput datasets, including:
- typical read quality control metrics and operations
- extremely brief read mapping discussion